The TREC (Traversing European Coastlines) expedition represents a paradigmatic shift in coastal ecosystem research, establishing the first continent-wide, standardized approach to understanding the complex interactions between terrestrial and marine environments across Europe’s extensive 68,000 km² coastline. This ambitious scientific endeavor, led by the European Molecular Biology Laboratory (EMBL) in collaboration with the Tara Ocean Foundation, Tara Oceans Consortium, and over 150 research teams from 70 institutions across 29 European countries, has redefined our understanding of coastal biodiversity and ecosystem dynamics.
Scientific Framework and Methodology
The expedition’s innovative approach combines simultaneous sampling at the land-sea interface using two complementary platforms: the schooner Tara for marine sampling and EMBL’s Advanced Mobile Laboratories for terrestrial sampling. We are particularly involved in the terrestrial ecosystems, myself being the head of this part. This dual methodology ensures comprehensive data collection at each of the 115 land-sea transects across 21 European countries, providing unprecedented spatial coverage for coastal ecosystem analysis.
The standardized sampling protocol represents a significant methodological advancement, enabling direct comparison of data across national borders and diverse biogeographic regions. Researchers collect biological samples and environmental data including soil, sediment, aerosol, and water samples, along with measurements of pollutants such as antibiotics, hormones, pesticides, and heavy metals. This comprehensive approach addresses the critical knowledge gaps in understanding how anthropogenic pressures affect coastal biodiversity at molecular and cellular levels.

Biodiversity Discovery and Molecular Insights
The expedition’s preliminary findings have revealed extraordinary microbial diversity within European coastal ecosystems. Initial analyses suggest the discovery of hundreds of new microbial species at each sampling site, highlighting the remarkable richness of these environments. The project employs cutting-edge molecular techniques including meta-omics, single-cell genomics, and advanced barcoding methods to characterize organisms across all scales, from viruses and bacteria to multicellular algae and animals.
Building upon the success of previous Tara Oceans expeditions, which identified significant biosynthetic potential within the global ocean microbiome, TREC’s coastal focus provides complementary insights into land-sea transition zones. The expedition’s molecular approach has revealed complex symbiotic systems involving protist-prokaryote interactions and functional genome units within viral genomes, expanding our understanding of coastal microbial ecology.
Environmental Monitoring and Climate Change Implications
The expedition addresses critical environmental challenges facing European coastal regions, where 40% of Europe’s population resides. By investigating the molecular basis of organismal responses to environmental changes, TREC contributes to understanding climate change impacts on coastal biodiversity. The project specifically examines carbon fixation pathways, biodiversity loss patterns, and molecular adaptations to global warming and ocean acidification.
Recent research demonstrates the crucial role of biodiversity in carbon cycling and storage, with studies showing that biodiversity loss could result in significant global carbon losses under various climate scenarios. TREC’s integrated approach to studying coastal ecosystems provides essential data for understanding these biodiversity-carbon interactions in marine environments, particularly relevant given the high biodiversity and pollution levels characteristic of coastal habitats.
Technological Innovation and Scientific Infrastructure
The expedition has pioneered several technological innovations, most notably the Advanced Mobile Laboratory (AML), which has become a permanent EMBL service facility. This mobile experimental platform brings cutting-edge technology directly to sampling sites, enabling real-time analysis, advanced sample preparation, and immediate metadata acquisition . The AML’s capabilities include live imaging, electron microscopy, and sophisticated analytical equipment typically confined to fixed laboratory settings.

The integration of on-site analysis with traditional laboratory methods ensures sample integrity and enables researchers to study organisms within their natural environmental context. This approach addresses the fundamental challenge of sample degradation during transport, maximizing the scientific value of collected materials.
Policy Implications and Societal Impact
TREC’s standardized, pan-European approach provides critical data for evidence-based environmental policy development. The expedition’s focus on pollution gradients, antimicrobial resistance patterns, and ecosystem health indicators directly supports European Union environmental directives and marine protection strategies. The project’s collaborative structure, involving national research institutions across Europe, exemplifies successful international scientific cooperation in addressing transboundary environmental challenges.
The expedition’s public engagement components, including scientific workshops, educational programs, and stakeholder events, demonstrate the importance of science communication in building societal support for marine conservation. These activities have reached over 620 participants in some locations, fostering public understanding of coastal ecosystem complexity and the need for protection.
Future Directions and Long-term Impact
With sampling completed in July 2024, the expedition enters its analytical phase, with comprehensive data analysis expected to continue for years or even decades. The September 2024 TREC Symposium brought together project members to review progress and establish collaborative frameworks for ongoing research. The expedition’s legacy extends beyond immediate scientific discoveries to include enhanced European marine research infrastructure and strengthened international scientific networks.
The TREC expedition establishes a new paradigm for coastal ecosystem research, demonstrating the power of integrated, standardized approaches to understanding complex environmental systems. As climate change and anthropogenic pressures continue to threaten coastal biodiversity, TREC’s comprehensive dataset and methodological innovations provide essential tools for ecosystem management and conservation strategies. The expedition’s success underscores the critical importance of international scientific collaboration in addressing global environmental challenges and protecting Europe’s invaluable coastal ecosystems for future generations.